“…Gene and predicted protein-protein interaction (PPI) enrichment analyses of RNA-seq data for of PAME CC14 (hereafter STS PAMEs unless otherwise noted) and control cells (see Figures 2A, left, and S2A for top 25 gene lists) revealed cytokine signaling, inflammatory/immune responses, and extracellular matrix organization in the upregulated (UP) cohort (Figures 2A,right,and S2C),including INSL4,CXCL1,3,6,8,10,IL1A,15,18,23,32,and CCL20,28, which can form a cytokine storm. PAMEs also expressed UP genes previously implicated in metastasis (e.g., L1CAM, SLC6A11, and YAP; Ganesh et al, 2020;Thompson, 2020;Mao et al, 2021). Similar analyses of downregulated (DOWN) genes highlighted DNA methylation, chromatin assembly, senescence, Notch signaling, and the repression of factors involved in intestinal lineage differentiation: ATOH1, CDX2, PAX4, and NEUROG3 (Figures S2A, S2B, and S2D; data not shown).…”