The passage of an electrical current through phosphoric acid doped polymer membranes involves parasitic migration of the acid, which imposes a critical issue for long-term operation of the high temperature polymer electrolyte membranes fuel cell (HT-PEMFC). To elucidate the phenomenon, a three-layered membrane is constructed with embedded micro reference electrodes to measure phosphoric acid redistribution in a polybenzimidazole based membrane. Under a constant load, a concentration gradient develops due to the acid migration, which drives the back diffusion of the acid and eventually reaches a steady state between migration and diffusion. The acid gradient is measured as a difference in local ohmic resistances of the anode-and cathode-layer membranes by electrochemical impedance spectroscopy. The phosphoric acid diffusion coefficient through the acid doped membrane is about 10 −11 m 2 s −1 , at least one order of magnitude lower than that of aqueous phosphoric acid solutions. The anion (H 2 PO 4 − ) transference number is found to range up to 4% depending on current density, temperature and atmospheric humidity of the cell, implying that careful control of the operating parameters is needed in order to suppress the vehicular proton conduction as a degradation mitigation strategy.