INTRODUCTION
Since December, 2020, the ID NOW was implemented for use in 4 different populations across Alberta: in mobile units as part of community outbreak response, COVID19 community collection sites, emergency shelters and addiction treatment facilities (ES), and hospitals.
OBJECTIVE
Diagnostic evaluation of the ID NOW in various real world settings among symptomatic and asymptomatic individuals
METHODS
Depending on the implemented site, the ID NOW was tested on patients with symptoms suggestive of COVID-19, asymptomatic close contacts or asymptomatic individuals as part of outbreak point prevalence screening. From Jan to April, a select number of sites also switched from using oropharyngeal swabs to combined oropharyngeal + nasal (O+N) swabs. For every individual tested, two swabs were collected: one for ID NOW testing and the other for either reverse-transcriptase polymerase chain reaction (RTPCR) confirmation of negative ID NOW results or for variant testing of positive ID NOW results.
RESULTS
A total of 129,112 paired samples were analyzed (16,061 RTPCR positive). 81,697 samples were from 42 COVID-19 community collection sites, 16,924 from 69 rural hospitals, 1,927 from 9 ES, 23,802 samples from 6 mobile units that responded to 356 community outbreaks, and 4,762 from 3 community collection sites and 1 ES using O+N swabs for ID NOW testing. ID NOW sensitivity was highest among symptomatic individuals presenting to community collection sites [92.5%, 95% confidence interval (CI) 92.0-93.0%, n=10,633 RTPCR positive] and lowest for asymptomatic individuals associated with community outbreaks (73.9%, 95% CI 69.8 to 77.7%, n=494 RTPCR positive). Specificity was greater than 99% in all populations tested, but positive predictive value (PPV) was lower among asymptomatic populations (82.4 to 91.3%) compared to symptomatic populations (96.0 to 96.9%). There was no statistically significant differences in sensitivity with respect to age, gender, NP vs OP swab for RTPCR confirmation, variants of concern, or with combined oropharyngeal and nasal swabs using COVID-19 ID NOW testing.
CONCLUSIONS
Sensitivity of ID NOW SARS CoV2 testing is highest when used on symptomatic community populations not seeking medical care. Sensitivity and PPV drops by approximately 10% when tested on asymptomatic populations. Using combined oropharyngeal and nasal swabs did not improve ID NOW performance.