Effective CD8 + T-cell responses against tumor or microbial antigens that are not directly expressed in antigen-presenting cells (APCs) depend on the cross-presentation of these antigens on MHC class I in APCs. To identify signaling molecules that regulate crosspresentation, we used lentiviral-based RNA interference to test the roles of hundreds of kinases and phosphatases in this process. Our study uncovered eight previously unknown genes, consisting of one positive and seven negative regulators of antigen cross-presentation. Depletion of Acvr1c, a type I receptor for TGF-β family of signaling molecules, led to an increase in CD80 and CD86 co-stimulator surface expression and secreted IL-12 in mouse bone marrow-derived DCs, as well as antigen-specific T-cell proliferation.
Keywords:Antigen cross-presentation r Dendritic cells r Kinases r Phosphatases r RNA interference Supporting Information available online
IntroductionThe generation of cytotoxic T lymphocytes (CTLs) against tumor antigens of nonhematopoietic origin or viral agents that do not infect antigen-presenting cells (APCs) can be elicited in a process known as antigen cross-presentation [1]. Furthermore, the importance of this process in vivo during infection and in therapeutically generating antitumor immunity has now been established [2].Antigen cross-presentation remains poorly characterized at the molecular level. In particular, unbiased studies have not been used to dissect the process, with the exception of the work of Zou et al.[3] who used siRNAs to probe the role of 57 Rab GTPases. While Correspondence: Dr. Catarina F. Moita e-mail: lmoita@fm.ul.pt they identified 12 genes that affect cross-presentation, including the GTPase Rab3b/3c, further validation in vivo is still needed to validate these findings.To study this process, we used an arrayed library of shRNAexpressing lentiviruses to silence 691 genes (with ∼5 shRNAs targeting each gene) in DCs and identified eight genes that affect antigen cross-presentation by mouse bone marrow-derived dendritic cells (BMDCs). We also describe the initial characterization of one of the validated hits, Acvr1c, a receptor for the TGF-β family of signaling molecules.
Results and discussionTo identify genes involved in cross-presentation, we applied an shRNA-based genetic screening approach [4][5][6] Immunol. 2012Immunol. . 42: 1843Immunol. -1849 signaling components and pathways in DCs that play a role in cross-presentation to primary CD8 + T cells. We mostly targeted kinases and phosphatases because they are part of most regulatory pathways and can often be inhibited with small molecules. In fact, the definition of constriction points within signaling pathways has been a successful approach when analyzing biological complexity and that these constriction points, more often than not, materialize in kinases and phosphatases. We started by developing an in vitro assay to measure antigen cross-presentation by mouse BMDCs after infection with the TRC shRNA-expressing lentivirus. C57BL/6 mice were used as do...