Bovine coronavirus (BCoV) is associated with severe diarrhea, dehydration, and
depression, which result in significant economic damages in the dairy and beef
cattle industries worldwide. However, differences in the gut microbiota
structure and their correlations with differing physiological parameters between
BCoV-infected calves with diarrhea and recovered calves are not well understood.
In this study, fecal specimens were collected from 10 post-weaned calves, before
and after 2 months of fluid therapy, and the samples were used for microbiota
analysis. Following recovery, the alpha-diversity profiles (observed operational
taxonomic units [OTUs], and Chao1, Shannon, and Simpson indices) changed
significantly when compared with those of calves with diarrhea. Beta-diversity
analysis exhibited significant differences in gut microbiota compositions
between calves with diarrhea and those in the recovered state. The abundances of
eight phyla and thirteen genera in feces changed markedly after restoration of
BCoV diarrhea. In addition, our correlation study clearly revealed that
increased abundances of the genera
Caproiciproducens,
Pseudoflavonifractor
, and
Oscillibacter
negatively
correlated with serum glucose, and phosphorus levels, but positively correlated
with serum chloride in calves with diarrhea, whereas increased abundances of the
genera
Peptostreptococcaceae;Clostridium
(
Clostridium
cluster XI),
Intestinibacter,
Cellulosilyticum, Ruminococcus, Romboutsia, Paeniclostridium,
Clostridiaceae;Clostridium
and
Turicibacter
in
recovered calves showed the opposite pattern. These results suggest that
structural changes of the gut microbiota after recovery from BCoV infection
correlate with changes in physiological parameters. In conclusion, our data
provide evidence of gut microbiota-composition changes and their correlations
with the physical profiles of post-weaned calves, before and after fluid therapy
for BCoV-related diarrhea.