The ORYZA version 3 (ORYZA_V3) model is commonly used for simulating paddy rice (Oryza sativa L.) growth. However, few studies have investigated the performance of the ORYZA_V3 model for predicting in‐season crop growth variables, especially for the nitrogen translocation process among paddy rice organs in the whole growing season, i.e., from sowing to harvest stages. This study examines the prediction accuracy of seven paddy rice growth variables based on one cropping season of field experiment. The results show that: (a) The ORYZA_V3 model generates accurate prediction of paddy rice leaf area index (LAI), above‐ground biomass (AGB), and yield, where root mean square errors (RMSEs) are 0.98‐1.11 ha/ha, 2360.5‐3028.7 kg/ha, and 492.9‐515.2 kg/ha, respectively, coefficient of determination (R2) ranges from 0.76 to 1.00, and index of agreement (D‐index) ranges from 0.50 to 0.98. (b) The prediction accuracy of paddy rice leaf and stem nitrogen contents is acceptable, where RMSE ranges from 0.0017 to 0.0041 kg/kg, R2 ranges from 0.82 to 0.96, and D‐index ranges from 0.93 to 0.98. (c) The ORYZA_V3 model cannot generate accurate prediction of rice root and panicle nitrogen contents, where RMSE ranges from 0.0007 to 0.0022 kg/kg, R2 ranges from 0.01 to 0.20, and D‐index ranges from 0.17 to 0.65. The structural uncertainty in the nitrogen translocation module may be a major reason for the unacceptable crop model prediction. This study demonstrated the substantial potential of the ORYZA_V3 model for simulating and understanding paddy rice growth and organ nitrogen translocation.This article is protected by copyright. All rights reserved