The type 4 melanocortin receptor MC4R, a key relay in leptin signaling, links central energy control to peripheral reserve status. MC4R activation in different brain areas reduces food intake and increases energy expenditure. Mice lacking Mc4r are obese. Mc4r is expressed by hypothalamic paraventricular Thyrotropin-releasing hormone (TRH) neurons and increases energy usage through activation of Trh and production of the thyroid hormone tri-iodothyronine (T 3 ). These facts led us to test the hypothesis that energy homeostasis should require negative feedback by T 3 on Mc4r expression. Quantitative PCR and in situ hybridization showed hyperthyroidism reduces Mc4r mRNA levels in the paraventricular nucleus. Comparative in silico analysis of Mc4r regulatory regions revealed two evolutionarily conserved potential negative thyroid hormone-response elements (nTREs). In vivo ChIP assays on mouse hypothalamus demonstrated association of thyroid hormone receptors (TRs) with a region spanning one nTRE. Understanding how central genes involved in endocrine and metabolic axes are regulated is crucial to these problems.Thyroid hormones (THs) regulate metabolism and appetite (1, 2). THs, particularly the biologically active form tri-iodothyronine, T 3 , stimulate the basal metabolic rate. Hyperthyroidism leads to increased catabolism and weight loss; hypothyroidism causes weight gain (3). TH levels are kept within physiological ranges through hypothalamo-pituitary neuroendocrine feedback loops. Increased T 3 represses transcription of hypothalamic Thyrotropinreleasing hormone, Trh (4), the master regulator of the hypothalamo-pituitary-thyroid (HPT) axis (5). In turn, decreased T 3 output reduces metabolism and energy usage (6).Hypothalamic TRH neurons integrate numerous metabolic, endocrine, and neuronal signals (7). T 3 -responsive TRH neurons in the paraventricular nucleus (PVN) express all the functional TH nuclear receptors (TRs) and a key membrane receptor involved in energy homeostasis, namely the type 4 melanocortin receptor (MC4R). In situ hybridization studies show that nearly all TRH neurons in the caudal-medial parvocellular PVN express MC4R (8).MC4R, a membrane α-melanocyte stimulating hormone (αMSH) receptor, is integral to central leptin/melanocortin signaling (9). Leptin, a major satiety hormone, regulates energy homeostasis through food intake, energy partition, and thermogenesis (9). Centrally, leptin signaling is relayed mainly through the hypothalamic melanocortin system and MC4R-expressing neurons. Mc4r expression is widespread in the brain (10, 11), with high levels in the hypothalamus and brainstem, areas involved in energy homeostasis (12). The hypothalamus governs metabolism through complex neuroendocrine regulations. The brainstem also integrates metabolic signaling, notably regulating thermogenesis via the autonomic nervous system (13).In the PVN, leptin stimulates TRH production by coordinating pathways that culminate in MC4R activation and increased intracellular cAMP levels. A cAMP response bindin...