Salient object detection plays a vital role in image processing applications like image retrieval, security and surveillance in authentic-time. In recent times, advances in deep neural network gained more attention in the automatic learning system for various computer vision applications. In order to decrement the detection error for efficacious object detection, we proposed a detection classifier to detect the features of the object utilizing a deep neural network called convolutional neural network (CNN) and discrete quaternion Fourier transform (DQFT). Prior to CNN, the image is pre-processed by DQFT in order to handle all the three colors holistically to evade loss of image information, which in-turn increase the effective use of object detection. The features of the image are learned by training model of CNN, where the CNN process is done in the Fourier domain to quicken the method in productive computational time, and the image is converted to spatial domain before processing the fully connected layer. The proposed model is implemented in the HDA and INRIA benchmark datasets. The outcome shows that convolution in the quaternion Fourier domain expedite the process of evaluation with amended detection rate. The comparative study is done with CNN, discrete Fourier transforms CNN, RNN ad masked RNN.