Very high throughput satellite (VHTS) systems are expected to have a large increase in traffic demand in the near future. However, this increase will not be uniform throughout the service area due to the nonuniform user distribution, and the changing traffic demand during the day. This problem is addressed using flexible payload architectures, enabling the allocation of the payload resources in a flexible manner to meet traffic demand of each beam, leading to dynamic resource management (DRM) approaches. However, DRM adds significant complexity to the VHTS systems, which is why in this article, we are analyzing the use of convolutional neural networks (CNNs) to manage the resources available in flexible payload architectures for DRM. The VHTS system model is first outlined, for introducing the DRM problem statement and the CNN-based solution. A comparison between different payload architectures is performed in terms of DRM response, and the CNN algorithm performance is compared by three other algorithms, previously suggested in the literature to demonstrate the effectiveness of the suggested approach and to examine all the challenges involved.