BACKGROUNDApolipoprotein ε4 (APOE ε4) has been associated with cognitive decline in Parkinson's disease (PD), but little is known about its relationship with motor and other non‐motor symptoms, and whether APOE ε4 retains an influence on cognition when other factors are considered.OBJECTIVETo investigate the impact of APOE ε4 on motor/non‐motor symptoms and its relationship with other factors affecting cognition in individuals with PD.METHODSWe analysed data from 7,616 individuals, comparing motor/non‐motor symptoms in different APOE genotypes using binary logistic regression. Multivariate logistic regression examined factors associated with cognitive impairments, including APOE ε4, Geriatric Depression Scale (GDS), Non‐motor Symptom Questionnaire (NMS), MDS‐UPDRS Part II, and physical activity level.RESULTSAPOE ε4 heterozygosity was modestly associated with lower cognitive scores (OR=0.92, 95% CI: 0.87‐0.99), while no significant association was found for any other non‐motor and motor symptoms. However, in multivariate analysis, cognitive impairment was associated with higher GDS (OR 1.28, 95% CI 1.23‐1.34), NMS (OR 1.22, 95% CI 1.19‐1.25), and MDS‐UPDRS Part II (OR 1.07, 95% CI 1.06‐1.09) scores, whereas physical activity was negatively associated (OR 0.99, 95% CI 0.98‐0.99). APOE ε4 was no longer significant after adjusting for these factors.CONCLUSIONSThere is a link between cognition and APOE ε4 in PD patients; however, when considering multiple factors, APOE ε4 plays a subordinate role. Other factors, such as depression, physical activity, and other non‐motor symptoms, demonstrate a stronger influence on cognitive impairment.This article is protected by copyright. All rights reserved.