Clinical gait analysis plays a central role in the rehabilitation of stroke patients. However, practical and technical challenges limit their use in clinical settings. This study aimed to validate SMARTGAIT, a deep learning-based gait analysis system that addresses these limitations. Eight stroke patients took part in the study at the Human Performance Research Centre of the University of Konstanz. Gait measurements were taken using both the marker-based Vicon motion capture system and the single-smartphone-based SMARTGAIT system. We evaluated the agreement for knee, hip, and ankle joint angle kinematics in the frontal and sagittal plane and spatiotemporal gait parameters between the two systems. The results mostly demonstrated high levels of agreement between the two systems, with Pearson correlations of ≥0.79 for all lower body angle kinematics in the sagittal plane and correlations of ≥0.71 in the frontal plane. RMSE values were ≤4.6°. The intraclass correlation coefficients for all derived gait parameters showed good to excellent levels of agreement. SMARTGAIT is a promising tool for gait analysis in stroke, particularly for quantifying gait characteristics in the sagittal plane, which is very relevant for clinical gait analysis. However, further analyses are required to validate the use of SMARTGAIT in larger samples and its transferability to different types of pathological gait. In conclusion, a single smartphone recording (monocular 2D RGB camera) could make gait analysis more accessible in clinical settings, potentially simplifying the process and making it more feasible for therapists and doctors to use in their day-to-day practice.