Urm1p is a ubiquitin-related protein that serves as a posttranslational modification of other proteins. Urm1p conjugation has been implicated in the budding process and in nutrient sensing. Here, we have identified the first in vivo target for the urmylation pathway as the antioxidant protein Ahp1p. The attachment of Urm1p to Ahp1p requires the E1 for the urmylation pathway, Uba4p. Loss of the urmylation pathway components results in sensitivity to a thiol-specific oxidant, as does loss of Ahp1p, implying that urmylation has a role in an oxidative-stress response. Moreover, treatment of cells with thiol-specific oxidants affects the abundance of Ahp1p-Urm1p conjugates. These results suggest that the conjugation of Urm1p to Ahp1p could regulate the function of Ahp1p in antioxidant stress response in Saccharomyces cerevisiae.An emerging theme in the regulation of protein function is the covalent attachment of one protein to another. An example of this type of modification is provided by ubiquitin, a 76-residue protein that can be attached to other proteins. In many cases, ubiquitination targets the modified proteins for degradation, but other regulatory effects of ubiquitination are also known. Ubiquitin is the founding member of a family of small modifier proteins present in most eukaryotes and known as ubiquitin-like proteins (Ubls) (20). As in the case of the ubiquitin pathway, the attachment of Ubls to targets requires a series of enzymatic steps that include an E1 (an activating enzyme), an E2 (a conjugating enzyme), and sometimes an E3 (protein ligase). Each Ubl is thought to be attached to other proteins via an isopeptide bond between the C terminus of the modifier and a lysine residue of a target protein (18). In contrast to ubiquitin, some of these Ubls do not appear to promote proteolysis but instead appear to alter the function or localization of the target (26,31,33,36).Most of the Ubls are attached to many targets and consequently are involved in the regulation of many processes. Probably the best-characterized ubiquitin-like pathway involves the attachment of SUMO to a rapidly growing set of targets. These substrates include RanGAP1, a Ran GTPase-activating protein involved in nucleocytoplasmic transport (29, 36); IB␣, an inflammatory-response regulatory protein (10); PML (promyelocytic leukemia protein), whose fusion to the retinoic acid receptor causes acute promyelocytic leukemia (29); and Cdc3p, Cdc11p, and Shs1p, proteins in the yeast Saccharomyces cerevisiae that are components of the septin ring involved in cytokinesis (25).In addition to sumoylation, four other ubiquitin-like pathways have been identified in yeast (11,20). The modifier of one of these protein conjugation systems is Urm1p (12); thus, the pathway is termed urmylation. The function of Urm1p conjugation is only beginning to be understood. The E1 for this pathway is Uba4p (12), but other components of the conjugation pathway, such as an E2 or an E3, have yet to be identified. Although urmylation has been linked to budding and inva...