Nanochannels are a powerful technique for detecting a
wide range
of biomolecules without labeling. The ion transport phenomena in nanochannel
arrays differ from those in single nanochannels and are caused by
interchannel communication. This study uses a fully coupled Poisson–Nernst–Planck
(PNP) and Navier–Stokes model to investigate ion transport
in nanochannel arrays. Instead of being set at a constant value, the
surface charge density used in this study is established by the protonation
and deprotonation of the silanol groups that are present on the walls
of the silicon-based nanochannels. The surface charge density of the
nanochannel walls varies with the number of nanochannels, the channel
lateral distance, and the background solution properties, which consequently
influence the ionic concentration distribution, flow velocity, and
electric field strength. For example, in different numbers of nanochannel
systems, the ion concentration in nanochannels is not much different,
but it is different in reservoirs, especially near the openings of
nanochannels. The number of nanochannels and the distance between
nanochannels can also affect the formation of electro-convective vortex
zones under certain conditions. These findings can aid in optimizing
the nanochannel array design by regulating the number and distance
of nanochannels and facilitating the construction of solid-state nanochannel
arrays with any desired nanochannel dimensions.