Ligation of the murine common carotid artery induces a reproducible remodeling response. The contribution of individual genes can be determined by comparison of the phenotypes of genetically modified mice. Although studies have shown the response to carotid artery ligation is influenced by many factors, individual analyses typically only consider a single factor, the presence of a gene of interest. Because of this limitation, measurements of the response to ligation show large variation, making the determination of significant difference between test groups difficult. In this study, we examine the hypothesis that the variation in the response to ligation is due to non-genetic factors in addition to genetic factors. Distance from the ligature, a variable common to all arterial ligation experiments, is an important source of variation and a significant predictor of the remodeling response. We find that the use of statistical regression is an improved analysis technique, as it allows the simultaneous consideration of multiple variables. We demonstrate this by showing improved sensitivity and novel findings in the analysis of the remodeling response in mice genetically mutant for the osteopontin gene. We conclude regression analysis provides a simple way to improve both comparative power and description of vascular remodeling. Chronic obstructive vascular pathology (eg, stenosis, restenosis, arteriosclerosis) remains a widespread health problem and the largest contributor to the morbidity and mortality of both men and women in developed nations. 1 These pathologies each involve a response to a physical stimulus, such as changes in shear stress, direct injury, or oxidative injury, resulting in vascular remodeling and neointima formation. As obstructive pathologies have been shown to involve complex regulation of several cell types, there continues to be great need for in vivo models to understand the mechanistic basis of the pathology.Murine models of vascular disease are especially useful in determining the contribution of specific gene products as genetically modified mice are easily generated and readily available. Current models include mice that spontaneously demonstrate chronic obstructive vascular disease 2 and induction of obstruction by direct injury of the vasculature. [3][4][5][6][7] The complete ligation of the carotid artery is one method of inducing a vascular remodeling response in mice. Originally described by Kumar and Lindner,7 this model has the advantages of being technically simple to perform and yielding a highly reproducible localized vascular remodeling response. This murine model is being increasingly used, and has been instrumental in defining the contributions of plasma protein systems, 3,8,9 cytokines, 10,11 and physical forces such as pressure 12 and shear stress 7 in the vascular remodeling response.Whereas the vascular lesions formed in response to some injuries such as endothelial denudation are relatively consistent over the involved arterial segment, carotid artery ligation induces ...