The vitamin K-dependent carboxylase is an integral membrane protein which is required for the post-translational modification of a variety of vitamin K-dependent proteins. Previous studies have suggested carboxylase is a glycoprotein with N-linked glycosylation sites. In the present study, we identified the N-glycosylation sites of carboxylase by mass spectrometric peptide mapping analyses combined with site-directed mutagenesis. Our mass spectrometric results show that the N-linked glycosylation in carboxylase occurs at positions N459, N550, N605, and N627. Eliminating these glycosylation sites by changing asparagine to glutamine caused the mutant carboxylase to migrate faster in SDS-PAGE gel analyses, adding further evidence that these sites are glycosylated. In addition, the mutation studies identified N525, a site not recoverable by mass spectroscopy analysis, as a glycosylation site. Furthermore, the potential glycosylation site at N570 is glycosylated only if all the five natural glycosylation sites are simultaneously mutated. Removal of the oligosaccharides by glycosidase from wild-type carboxylase or by eliminating the functional glycosylation sites by site-directed mutagenesis did not affect either the carboxylation or epoxidation activity when the small pentapeptide FLEEL was used as substrate, suggesting that N-linked glycosylation is not required for the enzymatic function of carboxylase. In contrast, when site N570 and the five natural glycosylation sites were mutated simultaneously, the resulting carboxylase protein was degraded. Our results suggest that N-linked glycosylation is not essential for carboxylase enzymatic activity but it is important for protein folding and stability.The vitamin K-dependent carboxylase, also known as gamma-glutamyl carboxylase (GGCX) 1 , is an integral membrane protein of the endoplasmic reticulum. It catalyzes the post-translational modification of specific glutamic acid residues of vitamin K-dependent proteins to γ-carboxyglutamic acid residues. This post-translational modification is critical for the biological functions of the vitamin K-dependent proteins involved in blood coagulation, bone metabolism, signal transduction, and cell proliferation (1-3). In addition to its vitamin K-dependent substrate, the carboxylation reaction, which occurs in the lumen of the ER (4, 5), requires the co-substrates carbon dioxide, oxygen, and vitamin K hydroquinone. During the process of carboxylation, the γ-proton of the glutamic acid is abstracted, followed by the addition of carbon dioxide (6-9). Concomitant with carboxylation, vitamin K hydroquinone is oxidized to vitamin K epoxide which must be converted back to vitamin K by the enzyme vitamin K epoxide reductase, thus completing the vitamin K cycle (1, 10). The formation of vitamin K epoxide during the carboxylation reaction has been called an epoxidation reaction (9,11,12 It has been reported that GGCX binds to lectin suggesting that it is a glycoprotein (14, 15). Moreover, Endoglycosidase H treatment of GGCX purifi...