Despite decades of research, how
life began on Earth remains one
of the most challenging scientific conundrums facing modern science.
It is agreed that the first step was synthesis of organic compounds
essential to obtain amino acids and their polymers. Several possible
scenarios that could accomplish this step, using simple inorganic
molecules, have been suggested and studied over the years. The present
study examines, using atomistic reactive molecular dynamics simulations,
the long-standing suggestion that natural cavitation in primordial
oceans was a dominant mechanism of organic molecule synthesis. The
simulations allow, for the first time, direct observation of the rich
and complex sonochemistry occurring inside a collapsing bubble filled
with water and dissolved gases of the early atmosphere. The simulation
results suggest that dissolved CH4 is the most efficient
carbon source to produce amino acids, while CO and CO2 lead
to amino acid synthesis with lower yields. The efficiency of amino
acid synthesis also depends on the nitrogen source used (i.e., N2, NH3) and on the presence of HCN. Moreover, cavitation
may have contributed to the increase in concentration of NH3 in primordial oceans and to the production and liberation of molecular
O2 into the early atmosphere. Overall, the picture that
emerges from the simulations indicates that collapsing bubbles may
have served as natural bioreactors in primordial oceans, producing
the basic chemical ingredients required for the beginning of life.