Acanthamoeba are free-living pathogenic
protozoa
that cause blinding keratitis, disseminated infection, and granulomatous
amebic encephalitis, which is generally fatal. The development of
efficient and safe drugs is a critical unmet need. Acanthamoeba sterol 14α-demethylase (CYP51) is an essential enzyme of the
sterol biosynthetic pathway. Repurposing antifungal azoles for amoebic
infections has been reported, but their inhibitory effects on Acanthamoeba CYP51 enzymatic activity have not been studied.
Here, we report catalytic properties, inhibition, and structural characterization
of CYP51 from Acanthamoeba castellanii. The enzyme displays a 100-fold substrate preference for obtusifoliol
over lanosterol, supporting the plant-like cycloartenol-based pathway
in the pathogen. The strongest inhibition was observed with voriconazole
(1 h IC50 0.45 μM), VT1598 (0.25 μM), and VT1161
(0.20 μM). The crystal structures of A. castellanii CYP51 with bound VT1161 (2.24 Å) and without an inhibitor (1.95
Å), presented here, can be used in the development of azole-based
scaffolds to achieve optimal amoebicidal effectiveness.