2 profile in pearl millet (Pennisetum glaucum (L.) R. Br). Application to measure root 3 system response to water stress in field conditions Abstract 27Pearl millet, unlike other cereals, is able to withstand dry and hot conditions and plays an 28 important role for food security in arid and semi-arid areas of Africa and India. However, low 29 soil fertility and drought constrain pearl millet yield. One of the main targets to address these 30 constraints through agricultural practices or breeding is root system architecture. In this study, 31 in order to easily phenotype the root system in field conditions, we developed a model to 32 predict root length density (RLD) of pearl millet plants from root intersection densities (RID) 33 counted on a trench profile in field conditions. We identified root orientation as an important 34 parameter to improve the relationship between RID and RLD. Root orientation was notably 35 found to differ between thick roots (more anisotropic with depth) and fine roots (isotropic at 36 all depths). We used our model to study pearl millet root system response to drought and 37 showed that pearl millet reorients its root growth toward deeper soil layers that retain more 38 water in these conditions. Overall, this model opens ways for the characterization of the 39 impact of environmental factors and management practices on pearl millet root system 40 development. 41 43 Pearl millet (Pennisetum glaucum (L.) R. Br., syn. Cenchrus americanus (L.) Morrone) is a 44 cereal crop domesticated in the Western part of Sahel about 5,000 years ago [1]. It is well 45 adapted to dry tropical climate and low-fertility soils and therefore plays an important role for 46 food security in arid and semi-arid regions of sub-Saharan Africa and India. In these areas, 47 pearl millet is one of the most important sources of nutritious food [2, 3] and is the staple crop 48 for nearly 100 million people [4, 1]. Its grain is rich in protein, essential micronutrients and 49 calories. It is also gluten-free and has hypoallergenic properties [4]. In a context of climate 50 change leading to unpredictable weather patterns and rising temperatures in West Africa [5, 51 6], pearl millet could play an even more important role for food security because it can 52 withstand hot and dry conditions that would lead to the failure of other locally grown cereal 53 crops such as maize or sorghum. However, pearl millet lags far behind other cereals in terms 54 of breeding and its yield is low. The recent sequencing of a reference genome and about 1, 55 000 accessions [4] open the way for a new era of genomic-based breeding in pearl millet.56However, this will depend on the availability of phenotyping methods to characterize and 57 exploit the available genetic diversity and identify interesting target traits.
58Drought and low soil fertility are among the most important factors limiting pearl millet 59 yield. The root system is responsible for water and nutrient uptake, and root system 60 architecture is therefore a potential target ...