Summary
For non‐model plants, functional characterization of genes is still hampered by lack of efficient stable transformation procedures. Here, we report a simple, fast and efficient transformation technique with
Agrobacterium rhizogenes
for generating stable transgenic roots in living plants to facilitate functional studies
in vivo
. We showed that injection of
A
.
rhizogenes
into stems of various plant species lead to stable transgenic root generation, which can sustain plant growth after the original, non‐transgenic roots were cut off. A transformation system was established for pigeon pea, a major woody food crop, after optimizing the selection of
A. rhizogenes
strains, bacterium concentration, injection position and seedling age.
RT
‐
PCR
and fluorescence observation indicated a transgenic root induction efficiency of about 39% in pigeon pea. Furthermore, induction of hairy roots was achieved in nine out of twelve tested economically important plants at an efficiency of 15–39%. As proof of concept, bimolecular fluorescence complementation (Bi
FC
) assay was applied to test the interaction between Cc
CIPK
14 and Cc
CBL
1/2 in pigeon pea. Additionally, ectopic expression of the
bZIP
transcription factor Md
HY
5 from apple confirmed the utility of the transformation technique for engineering anthocyanin synthesis in roots. Taken together, we show that this method allows fast
in vivo
studies of gene function in a wide range of plant species.