Despite great advancement in genetic typing, phenotyping is still an indispensable tool for categorization of bacteria. certain amino acids may be essential for bacterial survival, growth, pathogenicity or toxin production, which prompts the idea that the intrinsic ability to utilize single amino acid under live-or-die situation could be a basis for differentiation of bacteria species. In this study, we determined the single amino acid consumption profiles of 7 bacterial species, and demonstrated that most bacteria have species-specific pattern of amino acid consumption. We also discovered that bacterial strains from different hosts, toxigenicity, and antibiotic-resistance presented distinct preference for certain amino acids. Taken altogether, the amino acid consumption profiles showed potential to be a novel tool complementary to study not only bacterial categorization but also biochemical characteristics of the bacteria such that its phenotyping can be used to uncover strategies for nutritional, pharmaceutical, taxonomic, and evolutionary aspects of bacterial researches. Bacterial identification is crucial in a wide variety of applications including disease diagnosis, food safety, and environmental monitoring. In general, two distinct methods are used for bacterial identification; genotyping and the phenotyping. Genotypic methods such as DNA sequencing, refer to discrimination of bacterial strains based on their genetic content 1. On the other hand, phenotypic traits are based on the characteristics expressed by bacterial strains, which comprise morphological, physiological, and biochemical features. For example, Analytical Profile Index (API) and Biolog system are commonly used phenotypic methods which rely on the utilization and metabolism of simple chemical compounds 2,3. Although genotyping has recently become mainstream for bacterial strain typing, phenotypic methods still play an important role in many cases and provide crucial insights into bacterial strains. For instance, about two-thirds of genes from bacterial to mammalian cells have been shown to possess biochemical function, but only a small fraction of these genes are known to be associated with phenotypes 4,5. Therefore, more phenotypic information is desirable in understanding the roles of those inexplicable genes 6,7 and to discover their resultant behaviors in relations to pathology, epidemiology, and ecology. Amino acids (AAs) are critical substances for nitrogen and carbon metabolism in bacteria. Different bacteria may have different abilities to utilize AAs depending on their genetic and adopted differences as well as the nutritional availability from the environment, rendering significant variations in their phenotypes even when they belong to the same species. So far, bacteria utilize AAs in a species-dependent manner have been reported elsewhere. For example, Escherichia coli can use serine (Ser), aspartate (Asp), cysteine (Cys), glycine (Gly), glutamate (Glu), and alanine (Ala) as the sole carbon and nitrogen sources during aerobic grow...