“…On the other hand, the MD approach reduces the complexity by simplifying the interactions between particles to just five main types of interactions, namely, (I) nonbonded: van der Waals, Coulombic, and polarization interactions between two particles, (II) bonded: repulsion and attraction of the bond electron pair between two atoms in a bond, (III) angle: interactions between bond pair and valence electrons in two neighboring bonds, (IV) dihedral: bond pair electron interactions in a sequential series of three bonds (four atoms), and (V) improper: interactions between bond electrons among three bonds connected to a single atom. 11–13 A simple algebraic equation is required for each interaction to estimate the system energy. For instance, nonbonded interactions between two atoms, ignoring the polarization, can be obtained by the Buckingham and Coulomb potential equation
, where A , B , and C are constant coefficients called potential parameters, q i is the partial charge of the i th particle, and k is Coulomb's constant.…”