2009
DOI: 10.1007/s11064-009-9993-9
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An Improved Method to Obtain a Soluble Nuclear Fraction from Embryonic Brain Tissue

Abstract: This paper describes modifications of the standard methods for obtaining a soluble nuclear fraction from embryonic brain tissue. The main improvements are: (1) the inclusion of a low speed centrifugation step to prevent the appearance of high density contaminants, (2) a sucrose density gradient to remove perinuclear mitochondria and ER membranes and (3) a protein extraction approach which significantly enhances protein yield. To demonstrate the effectiveness of the method, pellets were analyzed by light and el… Show more

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Cited by 23 publications
(15 citation statements)
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“…The ionic detergent SDS is able to solubilize the nuclear and cytoplasmic cell membranes, as well as dissociate DNA from proteins. 34 A high concentration of SDS is more efficient to remove DNA content than a lower concentration of SDS, 35 which is also proved by our results (Fig. 1).…”
supporting
confidence: 80%
“…The ionic detergent SDS is able to solubilize the nuclear and cytoplasmic cell membranes, as well as dissociate DNA from proteins. 34 A high concentration of SDS is more efficient to remove DNA content than a lower concentration of SDS, 35 which is also proved by our results (Fig. 1).…”
supporting
confidence: 80%
“…Commonly used detergents include Triton X-100 and CHAPS for thick tissues, or low percentages of SDS (sodium dodecyl sulfate) for whole organ decellularization. These detergents solubilize the cell membrane and disrupt DNA (Meyer et al, 2006; Jones and Wagers, 2008; Giusti et al, 2009; Petersen et al, 2010; Reing et al, 2010; Crapo et al, 2011), though they have negative effects on protein and ultrastructure. Chelating agents, such as EDTA (ethylenediaminetetraacetic acid) and EGTA (ethylene glycol tetraacetic acid), help to dissociate cells from the ECM, while serine protease inhibitors, such as PMSF (phenylmethylsulfonyl fluoride), aprotinin, and leupeptin, prevent ECM damage (Crapo et al, 2011).…”
Section: Decellularization Of Tissues For Ecm-based Scaffold Productionmentioning
confidence: 99%
“…Purified nuclei and pure soluble nuclear fractions derived from them were prepared by an improved method recently developed by our group and described elsewhere (Giusti et al, 2009). Optic lobes of six embryos were pooled to obtain a single sample.…”
Section: Tissue Preparationmentioning
confidence: 99%