High-level expression of the full-length human retinoic acid receptor (RAR) a and the DNA binding domain of the RAR in Escherichia coli was achieved by using a T7 RNA polymerase-directed expression system. After induction, full-length RAR protein was produced at an estimated level of 20% of the total bacterial proteins. Both intact RAR molecules and the DNA binding domain bind to the cognate DNA response element with high specificity in the absence of retinoic acid. However, this binding is enhanced to a great extent upon the addition of eukaryotic cell extracts. The factor responsible for this enhancement is heat-sensitive and forms a complex with RAR that binds to DNA and exhibits a distinct migration pattern in the gel-mobility-shift assay. The interaction site of the factor with RAR is localized in the 70-amino acid DNA binding region of RAR. The hormone binding ability of the RARa protein was assayed by a charcoal absorption assay and the RAR protein was found to bind to retinoic acid with a Kdof 2.1 x 10'10M.All-trans-retinoic acid (RA), a vitamin A derivative, is a biologically active vertebrate morphogen. It has profound effects on cellular differentiation, pattern formation, and embryonic development. RA also has a striking effect on regenerating limbs and has been implicated as a natural morphogen in chicken and frog embryogenesis (refs. 1-5 and references therein). Functions of RA are presumed to be mediated in part by its nuclear receptor proteins that are members of the steroid hormone receptor superfamily. Three species of RA receptor (RAR) cDNAs have been cloned and are referred to as a, ,, and y (refs. 6-10). However, despite the fact that certain genes regulated by RAR have been identified (refs. 11-13 and (refs. 11 and 13). However, the affinity of this binding is greatly enhanced by a heat-sensitive factor in eukaryotic cells. Upon addition of cellular extracts to the gel-mobility-shift assay, the RAR-DNA complex is further retarded. We conclude that in vivo, RAR protein requires another protein factor for high-affinity DNA binding. We show herein that at least one site of the interaction between RAR and the factor is localized in the DNA binding domain of RAR.Activation of RAR is known to be triggered by the association with its ligand RA. However, determination of the accurate dissociation constant of RA with RAR from mammalian sources has been hampered because of the interference of the cellular RA binding protein in mammalian tissues (15). In contrast, the RAR produced in E. coli binds RA with high affinity, displaying a Kd of 2.1 x 10-1o M.
MATERIALS AND METHODSExpression of Human (h) RARa and RARDBD in E. coli. The cloning procedure offull-length hRARa cDNA was described in ref. 16. For expression of the DNA binding domain of RAR, the cDNA sequence of RARa corresponding to amino acids 87-156 (6) was PCR-amplified. An Nco I site and a BamHI site flanking the 5' and 3' ends, respectively, were put in for subsequent cloning into the pET-8c vector (14). The resulting plasmids pET-...