2021
DOI: 10.1016/j.foodchem.2020.128894
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An insect acetylcholinesterase biosensor utilizing WO3/g-C3N4 nanocomposite modified pencil graphite electrode for phosmet detection in stored grains

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Cited by 72 publications
(32 citation statements)
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“…Crystal structure for HSA was obtained from Protein Data Bank with PDB code 1AO6. YASARA (Yet Another Scientific Artificial Reality Application) Structure version 20.1.18 [43] was used for molecular docking using Genetic algorithm and AMBER03 force field as described elsewhere [44] . PyMol and LIGPLOT were used to map the protein‐ligand interactions.…”
Section: Methodsmentioning
confidence: 99%
“…Crystal structure for HSA was obtained from Protein Data Bank with PDB code 1AO6. YASARA (Yet Another Scientific Artificial Reality Application) Structure version 20.1.18 [43] was used for molecular docking using Genetic algorithm and AMBER03 force field as described elsewhere [44] . PyMol and LIGPLOT were used to map the protein‐ligand interactions.…”
Section: Methodsmentioning
confidence: 99%
“…The ligand-protein interactions and binding energies were calculated by applying a virtual screening module in YASARA software version 20.7.4 [ 106 ] that uses a modified AutoDock-Lamarckian Genetic Algorithm. The parameters used for the virtual screening and molecular docking have been described earlier [ 107 ], where AMBER03-FF was used with a hundred global docking runs and by keeping the random seed value of 1000. AutoDock local search (LGA-LS) was also used for selected top five ligands to reassure best binding and energy minimization.…”
Section: Methodsmentioning
confidence: 99%
“…The X-ray crystal structure of the target mammalian’s SD5ARII with a resolution of 2.8 Å was retrieved from Protein Data Bank (PDB ID: 7BW1). After docking, the binding energies (BEs) were noted, and the lowest values were chosen to view the interactions in PyMol ( Bhaskara Rao et al, 2014 ; Hassan et al, 2020 ; Bilal et al, 2021 ; Rehman et al, 2021 ).…”
Section: Methodsmentioning
confidence: 99%