Manganese is an essential trace metal. Microorganisms including bacteria, yeasts, and small multicellular animals, such as nematodes, are constantly challenged with changing environmental conditions that may limit manganese availability or expose the organisms to excess or toxic concentrations of this metal. Transport systems for the uptake, efflux, and intracellular distribution of manganese have been identified in several invertebrate microorganisms and those from bacterial systems, the yeast Saccharomyces cerevisiae, and the nematode Caenorhabditis elegans are discussed herein. These transporters allow organisms to survive under a variety of environmental conditions by mediating stringent control of intracellular manganese content. Regulation of manganese transporters, both at transcriptional and post-translational levels, is a key to this tight control of manganese uptake. The mechanisms of manganese uptake, distribution, and elimination identified in bacteria, yeasts, and nematodes are likely to be conserved, at least in part, in more complicated invertebrate organisms.