Grass carp is an important commercial fish widely cultured in China. Large range of 16 temperature, in particular extremely low temperature, has dramatic effects on the aquaculture of this 17 teleost. However, there is relatively little research on the molecular responses in the fish exposed to 18 cold. Given the limited vision of approaches targeting individual genes, we investigated the 19 transcriptome profiles of brain in response to cold in order to comprehensively characterize 20 molecular mechanisms behind it. This study indicated that the estrogen signaling pathway was 21 inhibited in brain when grass carp acclimated to low temperature, while terpenoid backbone 22 biosynthesis pathway and steroid biosynthesis pathway were significantly activated. Such a result 23 implied the crucial role of cholesterol in cold acclimation. Moreover, plenty of differentially expressed 24 genes associated with spliceosomes were enriched during cooling process, which suggested 25 alternative splicing may be involved in the regulation of biological process in acclimation to 26 temperature changes. In researches on extremely low-temperature tolerance, we identified four 27 genes (DUSP1, HSPA6, NR4A1 and GADD45B) associated with MAPK signaling pathway. The four 28 genes, extensively up-regulated at 4℃ and remained relatively low expression at moderate 29 temperature, were closely related with extremely cold condition. Further examination of the 30 candidate genes can provide insights into the mechanisms of grass carp to endure extremely low 31 temperature in the winter.
34As the "abiotic master factor" [1], water temperature controls all the physiological and 35 behavioural parameters of fish [2]. In the past few decades, the world has suffered climate caprice 36 which seriously endangered aquatic poikilotherms' survival and damaged aquaculture industry [3].37 Given the ecological and economic importance of fish, the influence of the interaction between fish 38 and water temperature has been comprehensively studied but far from concluded.
39While the effect of high-temperature on fish has been concerned and studied extensively due 40 to the acceleration of global warming [4], low temperature caused much more fish death and 41 brought acute economic losses to aquaculture industry [5]. Compared with studies on mammals 42 and birds, the research on cold adaptation of fish is relatively limited and the underlying 43 mechanisms remains obscure. Nevertheless, some researches have thrown light on the response 44 of fish to cold [2, 6]. As a way to respond ambient temperature change, migratory fishes simply 45 swim to suitable areas. However, non-migratory fishes have to tolerate low-temperature condition 46 with special mechanisms. Indeed, fishes living in cold water areas with low-temperature throughout 47 the year have unique physiological mechanisms to adapt the adverse conditions [7, 8]. The most 48 notable example was the antifreeze protein in Antarctic fishes [9]. In addition, some studies 49 revealed that the lack of hemoglobin...