Saksenaea is a monotypic genus belonging to the order Mucorales and capable of producing severe human infections. Through a polyphasic study based on analysis of the sequences of the internal transcribed spacer (ITS) region, domains D1 and D2 of the 28S rRNA gene, and the elongation factor 1␣ (EF-1␣) gene, as well as by evaluation of relevant morphological and physiological characteristics of a set of clinical and environmental strains, we have demonstrated that Saksenaea vasiformis is a complex of species. We propose as new species Saksenaea oblongispora, characterized by oblong sporangiospores and unable to grow at 42°C, and Saksenaea erythrospora, characterized by large sporangiophores and sporangia and by ellipsoid sporangiospores, biconcave in the lateral view. Itraconazole, posaconazole, and terbinafine were active against all isolates included in the study, while amphotericin B, voriconazole, and the echinocandins showed low activity.The genus Saksenaea S. B. Saksena, belonging to the subphylum Mucoromycotina, was first isolated from a forest soil in India (38). Saksenaea vasiformis S. B. Saksena, the only species of the genus, is a filamentous fungus reported in soil, driftwood, and grains (1, 12, 34), characterized by flask-shaped sporangia, short sporangiophores, oval sporangiospores, and dark rhizoids. It is a thermotolerant fungus that grows between 25°C and 44°C (13, 24, 44) and is able to cause severe human infections in both immunocompromised and immunocompetent hosts. Mucormycosis caused by S. vasiformis most often occurs after traumatic implantation of the fungus but can also be due to inhalation of spores (18), spider bites, insect stings, and the use of indwelling catheters (11,22,28,31). Clinical cases seems to be more common in tropical and subtropical climates than elsewhere and have been reported from Australia (16,19,22,40,48), India (6,7,11,33), the United States (1,8,31,35,45), Thailand (44), Tunisia (28), the Middle East (2, 25), and Central and South America (9, 47).Recent molecular studies, based mostly on internal transcribed spacer (ITS) sequences, which have proven to be a good phylogenetic marker in the Mucorales (5), have demonstrated unexpectedly high genetic diversity within the most relevant clinical species of this order (3,4,21). In the case of Saksenaea vasiformis, a few studies have also demonstrated relatively high intraspecific genetic diversity (9, 28), suggesting that more than one phylogenetic species may be present within this morphospecies.To identify possible cryptic species in S. vasiformis, we performed a polyphasic study, based on sequence analysis of three loci, and evaluated different morphological and physiological characteristics for a diverse panel of strains.
MATERIALS AND METHODSFungal strains. A total of 11 strains from different reference culture collections were included in the study (Table 1) DNA extraction, amplification, and sequencing. For sequencing of the ITS region, DNA was extracted and purified directly from fungal colonies by following a sl...