“…We consider the measured life time of 0.22 s to characterize the s cis-trans isomerization in center I; i.e., the characteristic first order rate con stant of isomerization is k 1 = 4.5 s -1 . The characteristic life time for center II in subdo main IIIA is considerably longer (9.27 s), while the first order rate constant of isomerization is consider ably shorter k 2 = 1.1 × 10 -1 s -1 , which seems to be caused by relatively small size of pocket of this binding center (0.7 × 1.4 nm) [3][4][5], which is comparable with the size of dye molecule. For center II, the isomeriza tion process typical for cyanine dyes after attachment to biomacromolecule becomes sterically more hin dered owing to the small size of the pocket of center II.…”