The mammalian ureter contains two main cell types: a multilayered water-tight epithelium called the urothelium, surrounded by smooth muscle layers that, by generating proximal to distal peristaltic waves, pump urine from the renal pelvis toward the urinary bladder. Here, we review the cellular mechanisms involved in the development of these tissues, and the molecules that control the process. We consider the relevance of these biologic findings for understanding the pathogenesis of human ureter malformations. Molecule Abbreviation Box ALK Activin receptor-like kinase (growth factor receptor) AngII Angiotensin II (growth factor) BMP Bone morphogenetic protein (growth factor) DLGH Discs-large homolog (intracellular scaffolding protein) ERK Extracellular signal-regulated kinase (intracellular signaling molecule) ETV ETS transcription factor (transcription factor) FGFR Fibroblast growth factor receptor (growth factor receptor) FOX Forkhead box (transcription factor) FRAS Fraser syndrome (basement membrane molecule) FREM FRAS1-related extracellular matrix (basement membrane molecule) GDNF Glial cell line-derived neurotrophic factor (growth factor) GATA GATA-binding factor (transcription factor) GFR GDNF family receptor (growth factor receptor) HCN3 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 (ion channel) HNF1B Hepatocyte nuclear factor 1B (transcription factor) KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (growth factor receptor) MYOCD Myocardin (transcription factor associated protein) PAX Paired box (transcription factor) PI3K Phosphatidylinositol 3-kinase (intracellular signaling molecule) PLC Phospholipase C (intracellular signaling molecule) PTCH Patched (growth factor receptor) RET Rearranged during transfection (growth factor receptor) ROBO Roundabout (growth factor receptor) ROCK Rho-associated protein kinase (intracellular signaling molecule) SMAD Homologs of Drosophila protein, mothers against decapentaplegic and Caenorhabditis elegans protein SMA (intracellular signaling molecule) SHH Sonic hedgehog (growth factor) SLIT Slit homolog (growth factor) SOX SRY-related HMG-box (transcription factor) TBX T-box (transcription factor) TGF Transforming growth factor (growth factor) TSHZ Teashirt (transcription factor) UPK Uroplakin (urothelial membrane protein) VANGL Van Gogh-like (planar cell polarity protein)