2016
DOI: 10.1007/s11306-016-1023-8
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Annotation of the human cerebrospinal fluid lipidome using high resolution mass spectrometry and a dedicated data processing workflow

Abstract: IntroductionDue to its proximity with the brain, cerebrospinal fluid (CSF) could be a medium of choice for the discovery of biomarkers of neurological and psychiatric diseases using untargeted analytical approaches.ObjectivesThis study explored the CSF lipidome in order to generate a robust mass spectral database using an untargeted lipidomic approach.MethodsCerebrospinal fluid samples from 45 individuals were analyzed by liquid chromatography coupled to high-resolution mass spectrometry method (LC-HRMS). A de… Show more

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Cited by 42 publications
(44 citation statements)
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“…Ceramide lipid species were enriched in the lower phase (organic phase) and analysed using an untargeted lipidomic approach by liquid chromatography coupled with high-resolution MS (LC-HRMS) as described [20]. MS data treatments were performed using the XCMS software (https://metlin.scripps.edu/).…”
Section: Methodsmentioning
confidence: 99%
“…Ceramide lipid species were enriched in the lower phase (organic phase) and analysed using an untargeted lipidomic approach by liquid chromatography coupled with high-resolution MS (LC-HRMS) as described [20]. MS data treatments were performed using the XCMS software (https://metlin.scripps.edu/).…”
Section: Methodsmentioning
confidence: 99%
“…The samples were separated on an HTC PAL system (CTC Analytics AG) coupled with a Transcend 1250 liquid chromatographic system (Thermo Fisher Scientific, Inc.) using a Kinetex C8 2.6 μm 2.1 × 150 mm column (Phenomenex, Sydney, NSW, Australia). High-resolution mass spectrometry using a Q-Exactive mass spectrometer (Thermo Fisher Scientific, Inc.) was performed as previously described (66). The relative amount of each lipid was semi-quantified as the area of its corresponding chromatographic peak.…”
Section: Lipidomic Analysismentioning
confidence: 99%
“…Afterwards, the coupling of liquid chromatography to a high‐resolutive mass spectrometer, such as an Orbitrap interfaced to a quadrupole mass filter, allowed the separation of isobar species, as previously developed by Ref. to describe the human cerebrospinal fluid lipidome. The same methodology was used, whose annotated 462 molecular species belonging to 13 classes of lipids (Ceramide, SM, lysophosphatidylcholine, PC, PE, DG, TAG, phosphatidic acid, phosphatidylglycerol, PI, PS, lysophosphatidyl ethanolamine, and FA), of which 300 belonged to TAG and 66 of which were identified for the first time in caprine and bovine milks.…”
Section: New Approaches For Determining Major and Minor Components Ofmentioning
confidence: 99%