Inhibiting protein prenylation is an attractive means to modulate cellular processes controlled by a variety of signaling proteins, including oncogenic proteins such as Ras and Rho GTPases. The largest class of prenylated proteins contain a so-called CaaX motif at their carboxyl termini and are subject to a maturation process initiated by the attachment of an isoprenoid lipid by either protein farnesyltransferase (FTase) or protein geranylgeranyltransferase type I (GGTase-I). Inhibitors of FTase, termed FTIs, have been the subject of intensive development in the past decade and have shown efficacy in clinical trials. Although GGTase-I inhibitors (GGTIs) have received less attention, accumulating evidence suggests GGTIs may augment therapies using FTIs and could be useful to treat a myriad of additional disease states. Here we describe the characterization of a selective, highly potent, and cell-active GGTase-I inhibitor, GGTI-DU40. Kinetic analysis revealed that inhibition by GGTI-DU40 is competitive with the protein substrate and uncompetitive with the isoprenoid substrate; the K i for the inhibition is 0.8 nM. GGTI-DU40 is highly selective for GGTase-I both in vitro and in living cells. Studies indicate GGTI-DU40 blocks prenylation of a number of geranylgeranylated CaaX proteins. Treatment of MDA-MB-231 breast cancer cells with GGTI-DU40 inhibited thrombininduced cell rounding via a process that involves inhibition of Rho proteins without significantly effecting parallel mobilization of calcium via G␥. These studies establish GGTI-DU40 as a prime tool for interrogating biologies associated with protein geranylgeranylation and define a novel structure for this emerging class of experimental therapeutics.A promising strategy for the development of anti-cancer drugs is to suppress activation of oncogenic proteins such as Ras superfamily members. Functional Ras proteins require the addition of an isoprenoid lipid via a process directed by a carboxyl-terminal sequence termed the CaaX motif (1, 2), in which a cysteine (C) residue is followed by a dipeptide (aa) that is usually aliphatic and a variable residue (X) that dictates the prenyl group added. An Xaa residue of Ser, Met, Gln, Cys, or Ala directs the addition of the 15-carbon farnesyl lipid, whereas a Leu residue can direct modification by the 20-carbon geranylgeranyl isoprenoid (3). Following addition of the isoprenoid, most CaaX proteins are further processed by the Rce1 protease, which removes the aaX residues and isoprenylcysteine carboxyl methyltransferase (Icmt) 2 to yield a protein containing a carboxyl-terminal isoprenylcysteine carboxyl methylester (4). The CaaX prenyltransferase protein farnesyltransferase (FTase) and protein geranylgeranyltransferase type I (GGTase-I) (5) add either a 15-carbon farnesyl group or a 20-carbon geranylgeranyl group, respectively, to the cysteine found within the CaaX motif. The prenyltransferase holoenzyme consists of an ␣ subunit that is shared between the two forms of enzymes and a distinct  subunit that binds sub...