Introduction: Uropathogenic
Escherichia coli
(UPEC) strains equipped with putative virulence factors (VFs) are known to cause approximatel
y
90% of lower urinary tract infections (UTIs) or cystitis affecting individuals of all age groups. Only limited laboratory-based data on the correlation of antimicrobial resistant patterns and VFs of UPEC are available.
Materials and methods: A total of 100 non-duplicate
E. coli
isolates associated with community-acquired UTIs in sexually active women were analysed for antimicrobial susceptibility patterns and putative virulence-associated genes
.
Antimicrobial susceptibility testing (AST) was carried out by the Kirby-Bauer disk diffusion method, and results were interpreted as per Clinical and Laboratory Standards Institute (CLSI) guidelines. The isolates non-susceptible to ≥1 agent in ≥3 different antimicrobial categories were considered multidrug-resistant (MDR). Multiplex polymerase chain reaction assay was performed on each
E. coli
isolate to characterize putative virulence genes (VGs) such as
papA
,
malX, PAI
,
ibeA
,
fimH
,
fyuA
,
sfa/focDE
,
papGIII
,
iutA
,
papGI
,
kpsMTII
,
hlyA
,
papGII
,
traT
,
afa/draBC
,
cnf1,
vat
, and
yfcV.
Results: Capsule synthesis gene
kpsMTII
(59%)was the most predominant VG present, followed by serum resistance-associated transfer protein gene
traT
(58%) and adhesin gene
fimH
(57%); however, adhesin gene
papGI
(2%) was the least present. The prevalence of antimicrobial resistance was relatively high for commonly used oral antimicrobials of UTI treatment, such as trimethoprim-sulfamethoxazole (68%) and fluoroquinolones (63%). The majority of isolates were MDR (78%) and resistant to extended-spectrum cephalosporins (63.5%). Isolates resistant to norfloxacin and trimethoprim-sulfamethoxazole were also resistant to almost all available oral antimicrobials. Isolates resistant to extended-spectrum cephalosporins showed increased resistance to aztreonam and trimethoprim-sulfamethoxazole (84.6% each) and fluoroquinolones (ciprofloxacin and norfloxacin; 81.5% each). Fosfomycin and nitrofurantoin were the most sensitive antimicrobials for all these resistant isolates.
In a multivariate analysis, it was found that MDR isolates were associated with many of the VGs;
fimH
(65.4%) being the most frequent followed by
traT
(64.1%).
traT
(66.2%) and
iutA
(60.3...