2014
DOI: 10.1016/j.ympev.2014.05.020
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Antitropical distributions and species delimitation in a group of ophiocomid brittle stars (Echinodermata: Ophiuroidea: Ophiocomidae)

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Cited by 26 publications
(25 citation statements)
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“…III because only three sequences were available for the species. A mutation rate of 2.48% per nucleotide per million years was used for the COI, following other studies in echinoderms61. Between 50 million and one billion MCMC generations were run per species, sampled every 5,000 th –100,000 th step, and a burnin of 1,000–100,000 with the corresponding substitution model (GTR).…”
Section: Methodsmentioning
confidence: 99%
“…III because only three sequences were available for the species. A mutation rate of 2.48% per nucleotide per million years was used for the COI, following other studies in echinoderms61. Between 50 million and one billion MCMC generations were run per species, sampled every 5,000 th –100,000 th step, and a burnin of 1,000–100,000 with the corresponding substitution model (GTR).…”
Section: Methodsmentioning
confidence: 99%
“…We allowed a GTR + G model on partitioned codon sites and a Yule process speciation prior. A lognormal prior was used for "clock rate" such that the median reflected the mutation rate per lineage per year (2.48×10 −8 ) as determined by Naughton et al (2014) and 95% distribution between 1.2 × 10 −8 and 8.7 × 10 −8 thus covering a broad range of uncertainty. Sixteen test runs of 10 8 generations were used to test and adjust priors and their effects on convergence, mixing and parameter estimates.…”
Section: Methodsmentioning
confidence: 99%
“…Most of the lineages that spread from north to south in shallow water did so on the American side, with the consequence that the Other important coastal arrivals from the north include otarioid pinnipeds with at least two colonizations by fur seals and sea lions (Churchill, Boessenecker, & Clementz, 2014;Valenzuela-Toro, Gutstein, Varas-Amalca, Suarez, & Pyenson, 2013;Yonegawa, Kohno, & Hasegawa, 2009), at least four cases among cancrid crabs (Schweitzer & Feldmann, 2000), the bryozoan Membranipora (Schwaninger, 2008), the kelp-associated amphipod Perampithoe (Conlan & Chess, 1992), the brittle star Ophiopteris (Naughton, O'Hara, Appleton, & Cisternas, 2014), the ranellid gastropods Argobuccinum (represented in the North Pacific by the extinct Mediargo) and Fusitriton (Beu, 2010), the lottiid limpet Lottia orbignyi (represented in the north by L. persona; see Espoz, Lindberg, Castilla, & Simoson, 2004), the grazing tegulid gastropod Chlorostoma (DeVries, 2007), and the muricid Brassilabrum (related to the extinct northern Califostoma; see Bean & Vermeij, 2016).…”
Section: Dispersal From North To Southmentioning
confidence: 99%