Apolipoprotein E4 (apoE4) and female sex are risk factors for developing Alzheimer's disease. It is unclear whether apoE4 contributes to behavioral function at younger ages. Standard neuropsychological assessments [intelligence quotient (IQ), attention, and executive function] and a test developed in this laboratory (Memory Island test of spatial learning and memory) were used to determine whether E4 and sex affect neuropsychological performance in healthy primary school children (age 7-10). A medical history was also obtained from the mother to determine whether negative birth outcomes were associated with apoE4. Mothers of apoE4ϩ children were more likely to report that their newborn was placed in an intensive care unit. A sex difference in birth weight was noted among apoE4Ϫ (males Ͼ females), but not apoE4ϩ, offspring. Conversely, among apoE4ϩ, but not apoE4Ϫ children, there was a sex difference in the Wechsler Abbreviated Scale of Intelligence (WASI) vocabulary score favoring boys. ApoE4Ϫ girls had better visual recall than apoE4ϩ girls or apoE4Ϫ boys on the Family Pictures test. Finally, apoE4ϩ, unlike apoE4Ϫ, children did not show spatial memory retention during the Memory Island probe trial. Thus, apoE4 may affect neurobehavioral performance, particularly spatial memory, and antenatal health decades before any clinical expression of neurodegenerative processes. (Pediatr Res 67: 293-299, 2010)