van der Waals forces, which are attractive interactions between electroneutral particles and fibers, are not as widely recognized as other collection mechanisms in fibrous filters. We developed a numerical model by combining computational fluid dynamics (CFD) and a discrete phase model (DPM) to predict the impact of van der Waals forces on particle dynamics in filter microstructures. The results were extended to establish an empirical model for the collection efficiency due to van der Waals forces. The filter microstructure was constructed by using an artificial three-dimensional (3D) filter domain with a signed distance function (SDF). We found that the collection efficiency due to van der Waals forces increased with a decrease in the porosity and fiber diameter. By testing the filter microstructures, our empirical model provided an appropriate prediction. This study contributes to a new understanding of the collection mechanism of van der Waals forces and offers a user-friendly estimation of the collection efficiency due to van der Waals forces.