The period between the fourteenth and seventeenth centuries in Old Dongola, Sudan, marks a significant political and religious transition. The Makurian kingdom collapsed, and in the sixteenth century, the city became subordinate to the Funj Sultanate. Simultaneously, domestic architecture exhibited a high level of uniformity, with urban space dominated by two-room houses clustered in compounds with a shared courtyard. In these transformative conditions, the seeming persistence of household requires explanation. This paper examines residues of human actions, applying a multielemental analysis of domestic floors of four house compounds dated from the fourteenth to the seventeenth century. It allowed us to understand domestic space in intensive terms, as created by everyday domestic activities. The analysis of macro- and micro-residues resulted in the identification of various ways particular households engaged with domestic space. In this study, the role of heterogeneous domestic space played in the persistence and changeability of households was discussed, particularly how the striated residential units coded relations of dwellers, while the smooth open spaces had creative potential. Lastly, it is proposed that the temporality of households did not align with the temporality of the political changes in the city.