Introduction:
Metabolic reprogramming plays a crucial role in tumor development by modifying tumor cell metabolism, which was also found in esophageal squamous cell carcinoma (ESCC).
Objectives
This study aims to explore the altered metabolic pathways for ESCC through joint-pathway analysis of differentially expressed metabolites and genes.
Methods
Differentially expressed metabolites in ESCC were collected from published tissue-based metabolomics studies. Differentially expressed genes in ESCC were obtained using bioinformatic analysis of online ESCC transcriptome data. Then, joint-pathway analysis was performed to explore the altered metabolic pathways in ESCC. Immunohistochemistry (IHC) staining and arginine-deprivation experiments were conducted to verified the key enzymes in metabolic pathway and their potential function in ESCC.
Results
A total of 9 tissue-based metabolomics studies revealed 495 differentially expressed metabolites in ESCC. Enrichment analysis of the 69 high-frequency metabolites, defined as reported by over 2 studies, showed that the top enriched pathways were urea cycle, arginine and proline metabolism and ammonia recycling. Besides, bioinformatic analysis of a dataset (GSE53625) showed 2679 differentially expressed genes in ESCC. Joint-pathway analysis illustrated that the top 5 significantly altered metabolic pathways were glycerolipid metabolism, ascorbate and aldarate metabolism, histidine metabolism, arginine and proline metabolism, and linoleic acid metabolism. IHC staining and arginine-deprivation experiments revealed the up-regulating of arginine transporter (CAT1) and characteristic of arginine-dependent proliferation in ESCC.
Conclusions
This study revealed the altered amino acid metabolism, especially arginine and proline metabolism, as the most significant metabolic characteristic in ESCC. However, further functional study is needed.