The paper is concerned with Fӧrster Resonance Energy Transfer (FRET) considered as a mechanism for communication between nanodevices. Two solved issues are reported in the paper, namely: signal generation and signal storage in FRET-based nanonetworks. First, luciferase molecules as FRET transmitters which are able to generate FRET signals themselves, taking energy from chemical reactions without any external light exposure, are proposed. Second, channelrhodopsins as FRET receivers, as they can convert FRET signals into voltage, are suggested. Further, medical in-body systems where both molecule types might be successfully applied, are discussed. Luciferasechannelrhodopsin communication is modeled and its performance is numerically validated, reporting on its throughput, bit error rate, propagation delay and energy consumption.
IntroductionWith the current rapid development of technology, electronic and mechanical devices can be much smaller than even a decade ago, at the same time gaining new operating functionalities. However, when the device scale goes to the size of single molecules, cooperation between such devices and contacting them from outside their networks become quite challenging issues. Fӧrster Resonance Energy Transfer (FRET), a phenomenon characterized by very small propagation delays and a good throughput, has already been proposed for nanocommunications [1] and has been proved to be an efficient mechanism for transferring data at nanodistances [2][3][4]. Research on FRET for nanocommunication purposes and its integration with other elements on nanoworld is though at an early stage.The main contribution of the paper is solving two issues that, until now, were not solved for FRETbased communications [5]. The first issue is concerned with FRET signal storage. A molecule receiving a FRET signal cannot hold it and the signal must quickly be released, usually emitting a photon. Here, we propose to use channelrhodopsins which are molecules that can be used as nanoconverters, changing FRET signals into a voltage which can be detected by other devices. The second issue concerns FRET signal generation. In FRET nanocommunication experiments so far, a FRET transmission was initiated by an external laser source, which is rather troublesome inside a human body. Instead, we propose bioluminescent luciferase molecules as FRET transmitters, which are able to generate FRET signals themselves, taking energy from chemical reactions. We further discuss medical in-body systems where such FRET-based communication between luciferases and channelrhodopsins might be applied. We consider a system of small vesicles, liposomes, circulating through human vascular system and collecting data about body condition. The data gathered by liposomes are delivered to a detector placed in a human vein. Data transmission is realized by a luciferase-channelrhodopsin FRET interface. We model layers of luciferase and channelrhodopsin molecules based on their molecular structures and then we use their spectral characteristics to assess the e...