This article investigates the differential impact of six civil society organizations’ (CSO) capacity-building factors on governance, using data from a survey of 366 Nepali non-governmental organizations. The factors include Organizational Commitment to Need-based Intervention, Institutionalized Learning Process, Creative Engagement of Staff in Decision-Making, Financial Management, Legal Enabling Environment, and Education of Leaders. Results from Multiple Regression in SPSS 16 show that all six capacity-building factors, both collectively and individually, significantly and positively influence CSO governance with large effect sizes. Notably, Organizational Commitment to Need-based Intervention, Institutionalized Learning Process, Creative Engagement of Staff in Decision-Making, and Financial Management explain 68% of the variance, while Legal Enabling Environment and Education of Leaders explain 19%. Financial management (38.3%) and creative engagement of staff in decision-making (26%) stand out as significant contributors, suggesting a need for targeted capacity-building efforts in these areas to enhance CSO governance. The study provides valuable insights for Confirmatory Factor Analysis and future longitudinal studies on the role of these factors in CSO governance.