Photosynthetic activities were analyzed in Chlamydomonas reinhardtii mitochondrial mutants affected in different complexes (I, III, IV, I ϩ III, and I ϩ IV) of the respiratory chain. Oxygen evolution curves showed a positive relationship between the apparent yield of photosynthetic linear electron transport and the number of active proton-pumping sites in mitochondria. Although no significant alterations of the quantitative relationships between major photosynthetic complexes were found in the mutants, 77 K fluorescence spectra showed a preferential excitation of photosystem I (PSI) compared with wild type, which was indicative of a shift toward state 2. This effect was correlated with high levels of phosphorylation of lightharvesting complex II polypeptides, indicating the preferential association of light-harvesting complex II with PSI. The transition to state 1 occurred in untreated wild-type cells exposed to PSI light or in 3-(3,4-dichlorophenyl)-1,1-dimethylureatreated cells exposed to white light. In mutants of the cytochrome pathway and in double mutants, this transition was only observed in white light in the presence of 3-(3,4-dichlorophenyl)-1,1-dimethylurea. This suggests higher rates of nonphotochemical plastoquinone reduction through the chlororespiratory pathway, which was confirmed by measurements of the complementary area above the fluorescence induction curve in dark-adapted cells. Photo-acoustic measurements of energy storage by PSI showed a stimulation of PSI-driven cyclic electron flow in the most affected mutants. The present results demonstrate that in C. reinhardtii mutants, permanent defects in the mitochondrial electron transport chain stabilize state 2, which favors cyclic over linear electron transport in the chloroplast.Metabolic processes of photosynthetic organisms depend on the regeneration of ATP through photosynthesis and respiration. Although these two processes are now well understood at the molecular and physiological levels, less is known about their mutual regulation. In eukaryotic cells, complex interactions between photosynthesis and respiration occur because both processes are linked by common key metabolites such as ADP/ATP, NAD(P)H, triose-P, and hexose-P (for review, see Hoefnagel et al., 1998).When the dependence of respiration on photosynthesis seems to rely essentially on the availability of substrates, the influence of respiration on photosynthesis is suggested to involve complex organizational changes in the PSs, known as state transitions. The transition from states 1 to 2 corresponds to the reversible transfer of a mobile pool of PSII lightharvesting complexes II (LHCII) from PSII to PSI along the thylakoid membrane (state 2 transition) and is triggered by persistent reduction of the plastoquinone (PQ) pool. This reduction causes the activation of an LHCII-kinase interacting with the quinine oxidizing site of cytochrome (Cyt) b6/f (for review, see Allen, 1992;Wollman, 2001). Due to its high affinity for the PSI-h subunit, phospho-LHCII then is bound preferential...