Presenilin 1 (PS1), mutated in pedigrees of early-onset familial Alzheimer's disease, is a polytopic integral membrane protein that is endoproteolytically cleaved into 27-kDa N-terminal and 17-kDa C-terminal fragments. Although these fragments are the principal PS1 species found in normal mammalian brain, the role of endoproteolysis in the maturation of PS1 has been unclear. The present study, which uses stably transfected mouse neuroblastoma N2a cells, demonstrates that fulllength polypeptides, derived from either wild-type or A246E FAD-mutant human (hu) PS1, are relatively short-lived (t1 ⁄2 1.5 h) proteins that give rise to the N-and C-terminal PS1 fragments, which are more stable (t1 ⁄2 ϳ 24 h). N-terminal fragments, generated artificially by engineering a stop codon at amino acid 306 (PS1-306) of wild-type huPS1, were short-lived, whereas an FADlinked variant that lacked exon 9 (⌬E9) and was not endoproteolytically cleaved exhibited a long half-life. These observations suggest that endoproteolytic cleavage and stability are not linked, leading us to propose a model in which wild-type full-length huPS1 molecules are first stabilized then subsequently endoproteolytically cleaved to generate the N-and C-terminal fragments. These fragments appear to represent the mature and functional forms of wild-type huPS1.A subset of familial Alzheimer's disease (FAD) 1 cases are caused by mutations in two related genes, termed presenilin 1 (PS1) and presenilin 2 (PS2) (1-3), which are functionally interchangeable with sel-12, a Caenorhabditis elegans molecule involved in Notch-mediated cell differentiation (4, 5). PS1 is a highly hydrophobic protein that spans the membrane eight times (6 -8), projecting the N-and C-terminal hydrophilic domains, as well as a large internal loop domain, into the cytoplasm. In transiently transfected cultured cells, PS1 protein, a 467-amino acid polypeptide, exhibits a relative mass of 43 kDa (9 -12). However, in cultured cells and in transgenic mice expressing either wild-type or FAD mutant PS1, the predominant PS1 species detected are ϳ27-kDa N-terminal (NTF) and ϳ17-kDa C-terminal fragments (CTF) that appear to be generated by endoproteolysis (9,(11)(12)(13)(14)(15). The role of endoproteolysis in PS1 maturation is not well understood as a noncleavable FAD variant (exon 9 deleted (⌬E9)) rescues the egg-laying defects of sel-12 mutant C. elegans (5, 16). Thus, it has been difficult to resolve whether function is provided by full-length PS1 or the endoproteolytic fragments.Previous studies of multiple lines of transgenic mice expressing wild-type human (hu) PS1 indicate that the synthesis/ accumulation of PS1 NTFs and CTFs is highly regulated; the levels of full-length PS1 increase in parallel with the levels of transgene-derived huPS1 mRNA, but the levels of huPS1 NTFs and CTFs plateau (9). Moreover, in animals expressing high levels of huPS1, the levels of endogenous mouse NTFs and CTFs fall below the threshold of detection (9, 15). These data suggest that the absolute levels of PS1 NTF an...