Properly quantifying the potential exposure of hyper-arid regions to climate extremes is fundamental to developing frameworks that can be used to manage these extremes. In the United Arab Emirates (UAE), rapid growth may exacerbate the impacts of climate extremes through urbanization (increased runoff), population and industrial development (more water demand). Water resources management approaches such as Managed Aquifer Recharge (MAR) application may help mitigate both extremes by storing more water from wet periods for use during droughts. In this study, we quantified the volumes of runoff from coastal watersheds discharging to the Gulf of Oman and the Arabian Gulf that could potentially be captured to replenish depleted aquifers along the coast and help reduce the adverse impacts of urban flooding. To this aim, we first downloaded and processed the Integrated Multi-satellite Retrievals for Global Precipitation Measurement Mission (IMERG) rainfall data for a recent wide-spread storm event. The rainfall product was then used as input to hydrologic models of coastal watersheds for estimating the resulting runoff. A multi-criteria decision analysis technique was used to identify areas most prone to runoff accumulation. Lastly, we quantified the volumes of runoff that could potentially be captured from frequency storms of different return periods and how rapid urbanization in the region may increase these runoff volumes creating more opportunities for the replenishment of depleted aquifers. Our results indicate that the average runoff from watersheds discharging to the ocean ranges between 0.11 km3 and 0.48 km3 for the 5-year and 100-year storms, respectively. We also found that these amounts will substantially increase due to rapid urbanization in the coastal regions of the UAE. In addition to water supply augmentation during droughts, potential benefits of application of MAR techniques in the UAE coastal regions may include flood control, mitigation against sea-level rise through subsidence control, reduction of aquifer salinity, rehabilitation of ecosystems, cleansing polluted runoff and preventing excessive runoff into the Gulf that can contribute to red tide events.