Nearly all cervical cancers are causally associated with Human Papillomavirus (HPV). The burden of HPV-associated dysplasias in Sub-Saharan Africa is influenced by HIV. To investigate the role of the bacterial microbiome in cervical dysplasia, cytobrush samples were collected directly from cervical lesions of 144 Tanzanian women. The V4 hypervariable region of the 16S rRNA gene was amplified and deep-sequenced. Alpha diversity metrics; Chao1, PD whole tree, and operational taxonomic Unit (OTU) estimates, displayed significantly higher bacterial richness in HIV positive patients (P = 0.01) than in HIV negative patients. Within HIV positive patients, there was higher bacterial richness in patients with high grade squamous intraepithelial lesions (HSIL; P = 0.13) than those without lesions. The most abundant OTUs associated with high-grade squamous intraepitheilal lesions (HSIL) were Mycoplasmatales, Pseudomonadales, and Staphylococcus. We suggest that a chronic mycoplasma infection of the cervix can contribute to HPV-dependent dysplasia by sustained inflammatory signals.
IntroductionHuman Papillomavirus (HPV) is the causative agent responsible for 99% of cervical cancers [1].HPV contributes to about 4.8% of all cancers [1]. The disease burden of HPV is most dramatic in developing regions of the world, with HPV being attributed to 14.2% of cancers in Sub-Saharan Africa [1]. Cervical cancer disproportionately affects Sub-Saharan Africa, where 9% of the world's female population over 15 years old accounts for 14% of the world's incident cervical cancer and 18% of cervical cancer-related deaths [2]. The current study uses cervical swab samples obtained from Tanzania, which has among the highest cervical cancer mortality rates by country. Sub-Saharan Affrica also has among the highest HIV rates in the world. The association between HIV and cervical cancer has been better studied than any other factor associated with HPV-related cancers. HIV infection has been strongly linked to increased risk of infection with HPV, and the severity of HPV pathogenesis [3][4][5]. HR HPV genotypes are more prevalent in HIV+ women, suggesting HIV infection provides an environment where these highrisk HPV's can better establish infection and replicate [6]. A likely factor in this is a decrease in T-cell surveillance, which results in an increase in HPV replication with decreasing CD4+ cell count, and other changes in the cervical immune microenvironment as HIV infection progresses.Multiple studies have shown an increase in HPV detection, cervical intraepithelial neoplasms in K l e i n e t a l
Demographic Data CollectionAll study participants who gave informed consent and were evaluated by study clinicians. A set of pre-tested, standardized questionnaires were used to gather demographic data. All personal identifiers were removed from samples to ensure patient confidentiality. With patients' permission, medical history was retrospectively retrieved from hospital medical records. Over 30 variables were identified and assessed in the questionn...