Objective: Body adiposity, especially ectopic fat accumulation, has a range of metabolic and cardiovascular effects. This study aimed to investigate whether thyroid function is associated with various regional fat quantities in euthyroid subjects. Methods: A total of 100 euthyroid men (free triiodothyronine (fT 3 ), 4.77G1.21 pg/ml; free thyroxine (fT 4 ), 1.38G0.21 ng/dl; and TSH, 2.09G0.91 mIU/ml) were enrolled in this cross-sectional study. We measured accumulated regional fat using 64-slice multi-detector computed tomography. Multiple linear regression analysis was used to determine whether accumulated fat in each region was associated with clinical parameters after adjusting for age. Results: FT 3 was inversely correlated with BMI (rZK0.232, PZ0.029) and LDL cholesterol level (rZK0.277, PZ0.019). FT 4 was inversely correlated with waist circumference (rZK0.350, PZ0.008) and BMI (rZK0.355, P!0.001). In multiple linear regression analysis, fT 3 and fT 4 levels were significantly associated with pericardial fat volume (fT 3 : BZK0.079, 95% CI K0.142 to K0.017, PZ0.013; fT 4 : BZK0.411, 95% CI K0.780 to K0.042, PZ0.030) in euthyroid men, independent of age. FT 3 level was inversely associated with intramuscular fat area (BZK0.059, 95% CI K0.106 to K0.011, PZ0.016) and hepatic fat quantity (BZK0.237, 95% CI K0.441 to K0.033, PZ0.024) in euthyroid men, independent of age. Conclusions: In euthyroid men, low levels of fT 3 and fT 4 were significantly associated with increased pericardial fat volume and BMI.