2014
DOI: 10.5890/dnc.2014.12.004
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Automatic Recognition and Tagging of Topologically Different Regimes in Dynamical Systems

Abstract: Abstract. Complex systems are commonly modeled using nonlinear dynamical systems. These models are often high-dimensional and chaotic. An important goal in studying physical systems through the lens of mathematical models is to determine when the system undergoes changes in qualitative behavior. A detailed description of the dynamics can be difficult or impossible to obtain for high-dimensional and chaotic systems. Therefore, a more sensible goal is to recognize and mark transitions of a system between qualita… Show more

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Cited by 28 publications
(21 citation statements)
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“…One particularly useful tool for this analysis is 1-dimensional persistent homology [32,33], which encodes how circular structures persist over the course of a filtration in a topological signature called a persistence diagram. This and its variants have been quite successful in applications, particularly for the analysis of periodicity [34][35][36][37][38][39][40][41], including for parameter selection [42,43], data clustering [44], machining dynamics [45][46][47][48][49], gene regulatory systems [50,51], financial data [52][53][54], wheeze detection [55], sonar classification [56], video analysis [57][58][59], and annotation of song structure [60,61].…”
Section: Introductionmentioning
confidence: 99%
“…One particularly useful tool for this analysis is 1-dimensional persistent homology [32,33], which encodes how circular structures persist over the course of a filtration in a topological signature called a persistence diagram. This and its variants have been quite successful in applications, particularly for the analysis of periodicity [34][35][36][37][38][39][40][41], including for parameter selection [42,43], data clustering [44], machining dynamics [45][46][47][48][49], gene regulatory systems [50,51], financial data [52][53][54], wheeze detection [55], sonar classification [56], video analysis [57][58][59], and annotation of song structure [60,61].…”
Section: Introductionmentioning
confidence: 99%
“…Exploration of stable topological structures (or 'shapes') in nosy multidimensional datasets has led to new insights, including the discovery of a subgroup of breast cancers [8], is actively used in image processing [9], in signal and time-series analysis [10,11,12,13,14,15]. The latter has primarily been applied to detect and quantify periodic patterns in data [16,17], to understand the nature of chaotic attractors in the phase space of complex dynamical systems [18], to analyze turbulent flows [19], and stock correlation networks [20].…”
Section: Introductionmentioning
confidence: 99%
“…The geometric method of topological data analysis (TDA), which lies at the core of this paper, is free from any statistical assumptions, and is able to detect critical transitions in complex systems (see, e.g., [2,3,22]). The input of the method is a point cloud -a snapshot image of the data -to which a geometric 'shape' is associated, and topological information on that shape is extracted.…”
Section: Introductionmentioning
confidence: 99%