Alzheimer’s disease (AD) is a multi-amyloidosis disease with Aβ deposits in the cerebral blood vessels, microaneurysms and senile plaques. How Aβ amyloidosis affects axon pathology is not well-examined. We studied the Aβ-related axonal phenotypes in the AD brains with histochemistry, immunohistochemistry and fluorescence imaging. We found that widespread axonal amyloidosis existed in the AD brain tissues with a distinct axonal enlargement phenotype. Aβ-positive axon diameters in AD brain tissues were 1.72 times as large as control brain axons by average and they showed a significant loss of axonal structural protein MAP2. Axonal amyloidosis was also associated with Tau phosphorylation and lysosome destabilization. In addition, axonal amyloidosis bore the markers of hemorrhagic insults such as ApoE, HBA, HbA1C, and Hemin. Under extreme conditions, axon breakage was observed, which likely results in Wallerian degeneration in some axons. We believe that axonal amyloidosis and enlargement associated with chronic microhemorrhage and lysosome destabilization is a major neurological defect in the Alzheimer’s disease.