Weed infestation in potato field has become a major concern to smallholder farmers and environment, requiring sustainable intervention. This study aimed to determine (i) whether metribuzin application rate (0, 0.5, 1 (standard), 1.5, and 2 kg ai ha−1) has effects on soil microbes and soil nutrients in the short term using potted soil and (ii) the influence of potato seed dormancy (short; Shangi variety and long; Unica variety) and planting technique (surface, ridge, or furrow planting) on the efficacy of weed management practice (metribuzin (480 g L−1) herbicide and hoeing) in the field. Bacterial colony counts were recorded upon isolation from the potted soil. Soil nutrients were also analysed before and after metribuzin treatment. Data on crop growth (height and stem count), weed abundance, yield, costs, and revenues were recorded from a field experiment. Morphologically distinct bacterial strains were tested for Gram reaction and response to carbon utilization using analytical profile index kits (API 50 CH and 20 NE). In total, nine distinct bacterial strains were isolated and all were Gram positive, with variation in response to carbon substrates. Concentration of 2.0 kg a.i ha−1 significantly (p ≤ 0.05) reduced bacterial count in the first day, followed by an increase in the subsequent incubation days, while 1.0 and 1.5 kg a.i ha−1 concentrations had the highest colony development index and species richness. Significant effects of metribuzin on soil pH, total N, and total organic C in the short term were revealed. Notably, weedy plots had the highest Shannon weed index. Weeds reduced stem count and height growth by 57% and 62% respectively. Plots with Shangi had 9.8% lower weed count than those with Unica and hence higher yield was recorded from the former. While surface planting had the lowest weed control efficacy, crop growth attributes, and yield, furrow and ridge planting were not significantly different. Weed abundance and crop growth attributes in metribuzin and hand-hoed plots did not differ significantly, yet hoeing resulted in 5.30 t ha−1 above that obtained from plots managed using metribuzin. Higher dry matter and tuber yield were observed from hoed plots with Shangi planted in furrow or ridge. Use of metribuzin resulted in higher net benefit ratio and marginal rate of return than hand hoeing. The results reveal that use of metribuzin early and later in the potato growing phase can minimize weed infestation, but the efficacy depends on planting method and seed dormancy.