Background:
Wolbachia, a common insect endosymbiotic bacterium that can influence pathogen transmission and manipulate host reproduction, has historically been considered absent from the
Anopheles (An.) genera, but has recently been found in
An. gambiae s.l. populations. As there are numerous
Anopheles species that have the capacity to transmit malaria, we analysed a range of species to determine
Wolbachia prevalence rates, characterise novel
Wolbachia strains and determine any correlation between the presence of
Plasmodium,
Wolbachia and the competing endosymbiotic bacterium
Asaia.
Methods:
Anopheles adult mosquitoes were collected from five malaria-endemic countries: Guinea, Democratic Republic of the Congo (DRC), Ghana, Uganda and Madagascar, between 2013 and 2017. Molecular analysis of samples was undertaken using quantitative PCR, Sanger sequencing,
Wolbachia multilocus sequence typing (MLST) and high-throughput amplicon sequencing of the bacterial
16S rRNA gene.
Results: Novel
Wolbachia strains were discovered in five species:
An. coluzzii,
An. gambiae s.s.,
An. arabiensis,
An. moucheti and
An. species ‘A’, increasing the number of
Anopheles species known to be naturally infected. Variable prevalence rates in different locations were observed and novel strains were phylogenetically diverse, clustering with
Wolbachia supergroup B strains. We also provide evidence for resident strain variants within
An. species ‘A’.
Wolbachia is the dominant member of the microbiome in
An. moucheti and
An. species ‘A’, but present at lower densities in
An. coluzzii. Interestingly, no evidence of
Wolbachia/Asaia co-infections was seen and
Asaia infection densities were also shown to be variable and location dependent.
Conclusions: The important discovery of novel
Wolbachia strains in
Anopheles provides greater insight into the prevalence of resident
Wolbachia strains in diverse malaria vectors. Novel
Wolbachia strains (particularly high-density strains) are ideal candidate strains for transinfection to create stable infections in other
Anopheles mosquito species, which could be used for population replacement or suppression control strategies.