Abstract. Around 30 species of marine bacteria can emit light, a
critical characteristic in the oceanic environment is mostly
deprived of sunlight. In this article, we first review current knowledge on
bioluminescent bacteria symbiosis in light organs. Then, focusing on
gut-associated bacteria, we highlight that recent works, based on omics
methods, confirm previous claims about the prominence of bioluminescent
bacterial species in fish guts. Such host–symbiont relationships are
relatively well-established and represent important knowledge in the
bioluminescence field. However, the consequences of bioluminescent bacteria
continuously released from light organs and through the digestive tracts to
the seawater have been barely taken into account at the ecological and
biogeochemical level. For too long neglected, we propose considering the
role of bioluminescent bacteria and reconsidering the biological carbon
pump, taking into account the bioluminescence effect (“bioluminescence shunt
hypothesis”). Indeed, it has been shown that marine snow and fecal pellets
are often luminous due to microbial colonization, which makes them a visual
target. These luminous particles seem preferentially consumed by organisms
of higher trophic levels in comparison to nonluminous ones. As a
consequence, the sinking rate of consumed particles could be either
increased (due to repackaging) or reduced (due to sloppy feeding or
coprophagy/coprorhexy), which can imply a major impact on global biological
carbon fluxes. Finally, we propose a strategy, at a worldwide scale, relying
on recently developed instrumentation and methodological tools to quantify
the impact of bioluminescent bacteria in the biological carbon pump.