Bacterial community structure analysis of soil treated with Parthenium hysterophorus L. derived green medium

Abstract

The present study encompasses the analysis of bacterial community structure of soil in the presence of Parthenium hysterophorus derived green medium. The 16S microbiome profiling of the soil revealed that it consists of members from 15 bacterial phyla with the most prominent being Proteobacteria. The other predominant phyla were Plantomycetes, Actinobacteria, Acidobacteria, Bacteroidetes, Chloroflexi and Firmicutes. The maximum proportion of the bacterial community remained unclassified at genus and species level. Among the classified population the maximum number of bacteria belonged to Flavisolibacter followed by Kaistobacter, Bacillus, Optitutus, Balneimonas, Steroidobacter, Rhodoplanes and Gemmata.

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“…5). Such observation was consistent with previous reports indicating that members of these genera were found to be predominant in pesticide treated soils (Kumar et al, 2020;Liu et al, 2020;Thelusmond et al, 2016), where they play important functional roles related to the nitrogen biogeochemical cycle (Aguiar et al, 2020;Yang et al, 2019). These genera were also correlated (Pearson correlation > 0.5, p < 0.05) with Cd and Cu (Fig.…”

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“…QIIME2 (Quantitative Insights Into Microbial Ecology version 2) is a microbiome analysis package which can translate the sequence data into interpretable visualizations along with statistical results (Kumar et al, 2020). Data denoising, featuring taxo-Eco.…”